Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_03358 | Not Available | Negative | 3472378 - 3473283 | 34400.0 |
| transposase insc for insertion element | SK85_03359 | Not Available | Negative | 3473241 - 3473606 | 13452.4 |
| periplasmic pilin chaperone | SK85_03360 | P77616 | Positive | 3473847 - 3474596 | 28493.6 |
| hypothetical protein | SK85_03361 | P76656 | Positive | 3474598 - 3475662 | 38556.8 |
| glycogen synthesis protein glgs | SK85_03362 | A7ZRT0 | Negative | 3475705 - 3475905 | 7892.31 |
| inner membrane protein yqij | SK85_03363 | Not Available | Positive | 3476174 - 3476803 | 23166.6 |
| inner membrane protein yqik | SK85_03364 | P77306 | Positive | 3476830 - 3478491 | 60730.2 |
| hlde protein | SK85_03365 | A7ZRT3 | Negative | 3479286 - 3480719 | 51053.6 |
| glutamate-ammonia-ligase adenylyltransferase | SK85_03366 | C4ZQX0 | Negative | 3480767 - 3483607 | 108425.0 |
| adenylate cyclase | SK85_03367 | P30871 | Negative | 3483630 - 3484931 | 48391.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





