Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ygiw | SK85_03338 | P0ADU6 | Negative | 3453250 - 3453642 | 14011.5 |
| transcriptional regulatory protein qseb | SK85_03339 | Q8XBS3 | Positive | 3453794 - 3454453 | 24719.2 |
| sensor protein qsec | SK85_03340 | P40719 | Positive | 3454450 - 3455799 | 50284.7 |
| nadph quinone reductase | SK85_03341 | P0AEY7 | Positive | 3456496 - 3457077 | 21892.1 |
| quinol monooxygenase | SK85_03342 | P0ADU3 | Positive | 3457108 - 3457422 | 11533.1 |
| dna topoisomerase 4 subunit b | SK85_03343 | P20083 | Negative | 3457470 - 3459362 | 70247.9 |
| esterase yqia | SK85_03344 | P0A8Z9 | Negative | 3459391 - 3459972 | 21642.7 |
| 3',5'-cyclic adenosine monophosphate phosphodiesterase cpda | SK85_03345 | P0AEW5 | Negative | 3459972 - 3460799 | 30939.7 |
| dehydrogenase | SK85_03346 | P0ADU9 | Negative | 3460824 - 3461246 | 16549.0 |
| adp-ribose pyrophosphatase | SK85_03347 | P83843 | Negative | 3461247 - 3461876 | 23668.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





