Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SK85_03318 | Q46855 | Negative | 3430544 - 3431500 | 36000.9 |
| alcohol dehydrogenase yqhd | SK85_03319 | Q46856 | Positive | 3431637 - 3432800 | 42099.4 |
| 2,5-diketo-d-gluconic acid reductase a | SK85_03320 | Q46857 | Positive | 3432905 - 3433732 | 31111.4 |
| hypothetical protein | SK85_03321 | Q46858 | Positive | 3433932 - 3434858 | 35060.1 |
| outer membrane lipoprotein | SK85_03322 | P65298 | Positive | 3434909 - 3435166 | 9499.55 |
| hypothetical protein | SK85_03323 | Q8FDK9 | Negative | 3435208 - 3437427 | 83527.5 |
| regulator | SK85_03324 | P44487 | Positive | 3437679 - 3438428 | 29239.9 |
| oxidoreductase ydfi | SK85_03325 | Not Available | Positive | 3438751 - 3440223 | 54542.9 |
| chlorophyll synthesis pathway protein bchc | SK85_03326 | P39400 | Positive | 3440220 - 3441236 | 36779.1 |
| ureidoglycolate dehydrogenase | SK85_03327 | O34736 | Positive | 3441247 - 3442257 | 36057.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





