Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03308 | Not Available | Negative | 3423371 - 3423781 | 15109.8 |
| hypothetical protein | SK85_03309 | Q7DFU6 | Negative | 3423781 - 3424134 | 12629.0 |
| hypothetical protein | SK85_03310 | P0DPP6 | Negative | 3424112 - 3424255 | 5465.53 |
| l-glyceraldehyde 3-phosphate reductase | SK85_03311 | Q46851 | Positive | 3424412 - 3425452 | 38835.4 |
| inner membrane protein | SK85_03312 | A7ZRN9 | Negative | 3425492 - 3425986 | 18642.3 |
| oxidoreductase | SK85_03313 | P0AG85 | Positive | 3426177 - 3427061 | 31488.8 |
| biopolymer transporter exbd | SK85_03314 | P0ABV4 | Negative | 3427100 - 3427525 | 15513.9 |
| biopolymer transporter exbb | SK85_03315 | P0ABU8 | Negative | 3427532 - 3428266 | 26289.0 |
| cystathionine beta-lyase metc | SK85_03316 | P06721 | Positive | 3428518 - 3429705 | 43129.7 |
| inner membrane protein yghb | SK85_03317 | P0AA62 | Positive | 3429845 - 3430504 | 24135.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





