Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system permease | SK85_03288 | Not Available | Negative | 3404054 - 3405133 | 39720.4 |
| hypothetical protein | SK85_03289 | P0AFA0 | Negative | 3405130 - 3406200 | 39882.1 |
| transcriptional regulator | SK85_03290 | Not Available | Negative | 3406231 - 3406791 | 20776.1 |
| hypothetical protein | SK85_03291 | Not Available | Negative | 3406803 - 3407627 | 31968.6 |
| inner membrane protein yghq | SK85_03292 | Q46841 | Negative | 3407627 - 3408976 | 48726.1 |
| atp-binding protein yghr | SK85_03293 | P64573 | Negative | 3409022 - 3409780 | 28139.1 |
| atp-binding protein yghs | SK85_03294 | Q46843 | Negative | 3409812 - 3410510 | 25674.4 |
| atp-binding protein yght | SK85_03295 | Q46844 | Positive | 3410699 - 3411391 | 25401.2 |
| phosphate transporter | SK85_03296 | P43676 | Negative | 3411440 - 3412939 | 53812.1 |
| bifunctional glutathionylspermidine synthetase/amidase | SK85_03297 | P0AES0 | Negative | 3413231 - 3415090 | 70489.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





