Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein glcg | SK85_03278 | P0AEQ2 | Negative | 3393128 - 3393532 | 13721.5 |
| glycolate oxidase iron-sulfur subunit | SK85_03279 | P52074 | Negative | 3393537 - 3394760 | 45144.8 |
| glycolate oxidase fad binding subunit | SK85_03280 | P52073 | Negative | 3394771 - 3395823 | 38381.3 |
| glycolate oxidase subunit glcd | SK85_03281 | P0AEQ0 | Negative | 3395823 - 3397322 | 53772.8 |
| glc operon transcriptional activator | SK85_03282 | P0ACL6 | Positive | 3397573 - 3398343 | 29043.3 |
| transcriptional regulator | SK85_03283 | Q46840 | Negative | 3398419 - 3399561 | 43466.8 |
| acyl-coa synthetase | SK85_03284 | A0A0H3C605 | Positive | 3399965 - 3401656 | 62131.3 |
| epimerase | SK85_03285 | A0A0H3C8X7 | Positive | 3401653 - 3402567 | 33579.2 |
| acyl carrier protein | SK85_03286 | Not Available | Positive | 3402599 - 3402847 | 9416.71 |
| 8-amino-7-oxononanoate synthase | SK85_03287 | A0A0H3C7E9 | Positive | 3402847 - 3404019 | 41679.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





