Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein g | SK85_03268 | P45773 | Negative | 3376188 - 3376643 | 16647.8 |
| type ii secretion system protein f | SK85_03269 | P45780 | Negative | 3376660 - 3377883 | 45002.9 |
| type ii secretion system protein e | SK85_03270 | P37093 | Negative | 3377883 - 3379376 | 55183.7 |
| type ii secretion system protein d | SK85_03271 | E3PJ86 | Negative | 3379376 - 3381436 | 74224.2 |
| type ii secretion system protein c | SK85_03272 | E3PJ87 | Negative | 3381466 - 3382284 | 29909.2 |
| lipoprotein | SK85_03273 | Q46835 | Negative | 3382443 - 3382853 | 14640.8 |
| leader peptidase pppa | SK85_03274 | Q46836 | Negative | 3382919 - 3383728 | 29440.7 |
| inner membrane lipoprotein | SK85_03275 | P0CK95 | Negative | 3383858 - 3388414 | 167656.0 |
| glycolate permease glca | SK85_03276 | Q46839 | Negative | 3388898 - 3390580 | 58923.7 |
| malate synthase g | SK85_03277 | P37330 | Negative | 3390935 - 3393106 | 80507.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





