Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate synthase | SK85_03258 | Q0P8T1 | Negative | 3367763 - 3368803 | 38753.8 |
| sialic acid synthase neud | SK85_03259 | Not Available | Negative | 3368800 - 3369423 | 22687.6 |
| polysialic acid transport atp-binding protein kpst | SK85_03260 | P23888 | Negative | 3369473 - 3370132 | 24940.1 |
| polysialic acid transporter kpsm | SK85_03261 | P23889 | Negative | 3370129 - 3370905 | 29559.4 |
| secretion pathway m-type protein, membrane anchored | SK85_03262 | Q46832 | Negative | 3371964 - 3372500 | 20332.6 |
| type ii secretion system protein l | SK85_03263 | Q46833 | Negative | 3372502 - 3373680 | 44259.5 |
| general secretion pathway protein k | SK85_03264 | P15750 | Negative | 3373677 - 3374654 | 36521.3 |
| type ii secretion system protein j | SK85_03265 | A0A4C3GMC1 | Negative | 3374651 - 3375256 | 22270.2 |
| type ii secretion system protein i | SK85_03266 | Q8VPC3 | Negative | 3375253 - 3375624 | 13691.5 |
| type ii secretion system protein h | SK85_03267 | P45774 | Negative | 3375621 - 3376184 | 21113.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





