Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase insc for insertion element is2 | SK85_03238 | Not Available | Positive | 3343460 - 3343825 | 13452.4 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_03239 | Not Available | Positive | 3343783 - 3344688 | 34443.9 |
| hypothetical protein | SK85_03240 | A5F9G0 | Positive | 3345188 - 3347278 | 76544.2 |
| hypothetical protein | SK85_03241 | Not Available | Positive | 3348140 - 3348382 | 8831.73 |
| hypothetical protein | SK85_03242 | Not Available | Positive | 3348673 - 3349041 | 14352.1 |
| hypothetical protein | SK85_03243 | Not Available | Positive | 3349045 - 3349260 | 7864.18 |
| hypothetical protein | SK85_03244 | Not Available | Negative | 3350370 - 3350669 | 10987.3 |
| hypothetical protein | SK85_03245 | P23843 | Negative | 3351398 - 3351529 | 4370.38 |
| hypothetical protein | SK85_03246 | O33654 | Positive | 3351866 - 3352753 | 31636.4 |
| hypothetical protein | SK85_03247 | Q79CE8 | Negative | 3352697 - 3353731 | 39857.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





