Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03218 | P46142 | Negative | 3323041 - 3324048 | 38444.4 |
| l-asparaginase 2 | SK85_03219 | P00805 | Negative | 3324165 - 3325211 | 36851.7 |
| hypothetical protein | SK85_03220 | P0ADT1 | Negative | 3325387 - 3326106 | 26457.8 |
| hypothetical protein | SK85_03221 | P38521 | Negative | 3326343 - 3326669 | 12823.2 |
| trna (guanine-n(7)-)-methyltransferase | SK85_03222 | A7ZR85 | Negative | 3326669 - 3327388 | 27308.9 |
| a/g-specific adenine glycosylase | SK85_03223 | P17802 | Positive | 3327549 - 3328601 | 39183.2 |
| fe(2+) trafficking protein | SK85_03224 | A7ZR88 | Positive | 3328629 - 3328904 | 10953.2 |
| membrane-bound lytic murein transglycosylase c | SK85_03225 | B7UI10 | Positive | 3328969 - 3330048 | 40112.8 |
| nucleoside permease nupg | SK85_03226 | P0AFF4 | Positive | 3330250 - 3331506 | 46392.0 |
| ornithine decarboxylase, constitutive | SK85_03227 | P21169 | Negative | 3331552 - 3333687 | 79498.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





