Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03198 | Not Available | Negative | 3304451 - 3305182 | 26364.7 |
| biosynthetic arginine decarboxylase | SK85_03199 | Q8XCX9 | Negative | 3305328 - 3307304 | 73890.6 |
| hypothetical protein | SK85_03200 | P46879 | Negative | 3307792 - 3308043 | 9534.78 |
| s-adenosylmethionine synthase | SK85_03201 | A7ZR64 | Positive | 3308099 - 3309253 | 41954.0 |
| galactose-proton symporter | SK85_03202 | P0AEP2 | Positive | 3309689 - 3311083 | 50985.6 |
| protein sprt | SK85_03203 | B7UHZ1 | Positive | 3311202 - 3311657 | 17784.6 |
| endonuclease-1 | SK85_03204 | P25736 | Positive | 3311752 - 3312459 | 26710.5 |
| ribosomal rna small subunit methyltransferase e | SK85_03205 | P0AGL8 | Positive | 3312539 - 3313270 | 26979.7 |
| glutathione synthetase | SK85_03206 | P04425 | Positive | 3313283 - 3314233 | 35563.0 |
| transcriptional regulator | SK85_03207 | A7ZR71 | Positive | 3314270 - 3314905 | 23333.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





