Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose transport system kinase | SK85_03188 | P11664 | Negative | 3293635 - 3294348 | 26855.0 |
| transcriptional regulator | SK85_03189 | Q83Q96 | Negative | 3294345 - 3294854 | 19212.8 |
| fructose-1,6-bisphosphatase 2 class 2 | SK85_03190 | P21437 | Negative | 3294876 - 3295841 | 34264.5 |
| dehydrogenase | SK85_03191 | P52048 | Negative | 3295838 - 3297115 | 45905.2 |
| pts system mannitol-specific cryptic eiicb component | SK85_03192 | P69827 | Negative | 3297130 - 3298518 | 49005.1 |
| mannitol-specific cryptic phosphotransferase enzyme iia component | SK85_03193 | P69825 | Negative | 3298546 - 3298989 | 16047.1 |
| serine protease | SK85_03194 | Not Available | Positive | 3299366 - 3300274 | 33053.8 |
| transketolase 1 | SK85_03195 | P27302 | Negative | 3300320 - 3302311 | 72229.7 |
| metalloprotease loip | SK85_03196 | P25894 | Positive | 3302589 - 3303347 | 26830.9 |
| agmatinase | SK85_03197 | B7NI01 | Negative | 3303395 - 3304315 | 33528.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





