Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine exporter protein argo | SK85_03178 | Q8FE55 | Negative | 3284864 - 3285499 | 23175.0 |
| small-conductance mechanosensitive channel | SK85_03179 | P0C0S2 | Negative | 3285638 - 3286498 | 30926.0 |
| fructose-bisphosphate aldolase class 2 | SK85_03180 | P0AB72 | Negative | 3286689 - 3287768 | 39133.3 |
| phosphoglycerate kinase | SK85_03181 | A7ZR34 | Negative | 3287983 - 3289146 | 41120.5 |
| d-erythrose-4-phosphate dehydrogenase | SK85_03182 | B7NHY6 | Negative | 3289196 - 3290215 | 37282.4 |
| hypothetical protein | SK85_03183 | Not Available | Positive | 3290587 - 3291018 | 15521.7 |
| abc transporter membrane protein | SK85_03184 | Not Available | Positive | 3291041 - 3291619 | 20240.9 |
| cobalt/nickel transport system permease | SK85_03185 | Not Available | Positive | 3291620 - 3292327 | 26827.4 |
| abc transporter atp-binding protein | SK85_03186 | Q8PY27 | Positive | 3292315 - 3292992 | 25017.3 |
| abc transporter atp-binding protein | SK85_03187 | Q035B2 | Positive | 3292986 - 3293663 | 25031.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





