Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-formyltetrahydrofolate cyclo-ligase | SK85_03168 | P0AC29 | Positive | 3272922 - 3273524 | 23321.5 |
| d-3-phosphoglycerate dehydrogenase | SK85_03169 | P0A9T2 | Negative | 3273913 - 3275145 | 44178.4 |
| ribose-5-phosphate isomerase a | SK85_03170 | A7ZR23 | Negative | 3275401 - 3276060 | 22861.8 |
| chromosome initiation inhibitor | SK85_03171 | B7NHX5 | Positive | 3276443 - 3277336 | 33503.7 |
| methylmalonyl-coa mutase | SK85_03172 | P27253 | Positive | 3277540 - 3279684 | 77838.6 |
| lao/ao transport system atpase | SK85_03173 | P27254 | Positive | 3279677 - 3280672 | 36612.0 |
| methylmalonyl-coa decarboxylase | SK85_03174 | P52045 | Positive | 3280683 - 3281468 | 29174.3 |
| propionyl-coa:succinate coa transferase | SK85_03175 | P52043 | Positive | 3281492 - 3282970 | 53858.6 |
| transcriptional regulator | SK85_03176 | P52044 | Negative | 3282967 - 3283863 | 34675.7 |
| hypothetical protein | SK85_03177 | P0ADS7 | Negative | 3284031 - 3284771 | 26636.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





