Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03158 | B7MM87 | Negative | 3260949 - 3261260 | 11964.1 |
| 6-phospho-beta-glucosidase bgla | SK85_03159 | Q46829 | Positive | 3261305 - 3262738 | 55034.2 |
| glycine dehydrogenase (decarboxylating) | SK85_03160 | B7NHW4 | Negative | 3262904 - 3265777 | 104311.0 |
| glycine cleavage system h protein | SK85_03161 | B7NHW5 | Negative | 3265895 - 3266284 | 13869.9 |
| aminomethyltransferase | SK85_03162 | B7UHV3 | Negative | 3266308 - 3267402 | 40151.0 |
| 2-octaprenylphenol hydroxylase | SK85_03163 | P25535 | Negative | 3267850 - 3269052 | 44172.2 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | SK85_03164 | P25534 | Negative | 3269075 - 3270253 | 42336.9 |
| xaa-pro aminopeptidase | SK85_03165 | P15034 | Negative | 3270250 - 3271575 | 49864.2 |
| hypothetical protein | SK85_03166 | A7ZR19 | Negative | 3271601 - 3272179 | 21230.8 |
| cell division protein zapa | SK85_03167 | A7ZR20 | Positive | 3272347 - 3272676 | 12594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





