Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SK85_02874 | Not Available | Positive | 2972530 - 2972655 | 4303.35 |
| tmrna | Not Available | Not Available | Positive | 2972569 - 2972931 | 18.01 |
| Cp4-57 prophage | SK85_02875 | P32053 | Positive | 2973116 - 2974315 | 45116.7 |
| hypothetical protein | SK85_02876 | Not Available | Negative | 2974350 - 2975096 | 28469.6 |
| hypothetical protein | SK85_02877 | Not Available | Negative | 2975093 - 2975914 | 30748.8 |
| Amber mutation-suppressing protein | SK85_02878 | P05460 | Negative | 2976234 - 2976806 | 21339.2 |
| Transactivation protein | SK85_02879 | P12551 | Negative | 2976880 - 2977380 | 18956.9 |
| Head size determination protein sid | SK85_02880 | P05461 | Negative | 2977377 - 2978111 | 27275.3 |
| Transcriptional regulator | SK85_02881 | P12552 | Positive | 2978663 - 2978929 | 9763.97 |
| Putative ci repressor | SK85_02882 | P05462 | Positive | 2979112 - 2979516 | 14822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





