Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate/ornithine carbamoyltransferase | SK85_03128 | Q8FE91 | Positive | 3224203 - 3225390 | 44058.7 |
| diaminopropionate ammonia-lyase | SK85_03129 | P66901 | Positive | 3225448 - 3226644 | 43330.1 |
| peptidase | SK85_03130 | P65809 | Positive | 3226702 - 3227913 | 44774.3 |
| d-phenylhydantoinase | SK85_03131 | A7ZQY1 | Positive | 3227966 - 3229351 | 51046.2 |
| carbamate kinase-like protein yqea | SK85_03132 | Q46807 | Positive | 3229399 - 3230331 | 33072.9 |
| yqeb family selenium-dependent molybdenum hydroxylase system protein | SK85_03133 | Q46808 | Negative | 3230372 - 3231997 | 57685.4 |
| hypothetical protein | SK85_03134 | Q46809 | Negative | 3232045 - 3232815 | 28105.0 |
| molybdenum cofactor cytidylyltransferase | SK85_03135 | Q46810 | Positive | 3232918 - 3233496 | 21497.1 |
| oxidoreductase fe-s subunit | SK85_03136 | Q46811 | Positive | 3233818 - 3236916 | 115644.0 |
| protein ssna | SK85_03137 | Q46812 | Positive | 3236919 - 3238247 | 48862.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





