Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_03108 | Not Available | Negative | 3208355 - 3208687 | 12216.5 |
| type iii secretion apparatus needle protein | SK85_03109 | P41784 | Negative | 3208707 - 3208946 | 9038.44 |
| type iii secretion apparatus protein prgh/eprh | SK85_03110 | P41783 | Negative | 3208960 - 3210150 | 45640.4 |
| hypothetical protein | SK85_03111 | Not Available | Positive | 3210398 - 3210898 | 19186.1 |
| hypothetical protein | SK85_03112 | Not Available | Positive | 3210900 - 3211193 | 11098.3 |
| hypothetical protein | SK85_03113 | Not Available | Negative | 3211255 - 3211617 | 13860.6 |
| hypothetical protein | SK85_03114 | P40702 | Negative | 3211644 - 3211847 | 8276.44 |
| hypothetical protein | SK85_03115 | P0A1M8 | Negative | 3211808 - 3212374 | 21811.2 |
| type iii secretion apparatus protein spar/ysct/hrct | SK85_03116 | P40701 | Negative | 3212383 - 3213150 | 28269.0 |
| hypothetical protein | SK85_03117 | P0A1L9 | Negative | 3213152 - 3213412 | 9430.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





