Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase insc for insertion element is2 | SK85_03098 | Not Available | Positive | 3202915 - 3203280 | 13452.4 |
| transposase insd for insertion element is2a/d/f/h/i/k | SK85_03099 | Not Available | Positive | 3203238 - 3204143 | 34400.0 |
| hypothetical protein | SK85_03100 | P76639 | Positive | 3204187 - 3204534 | 13471.6 |
| hypothetical protein | SK85_03101 | Q46789 | Positive | 3204702 - 3204920 | 8055.23 |
| peptidoglycan-binding-like protein | SK85_03102 | Q46790 | Positive | 3205105 - 3205479 | 14501.9 |
| two-component system response regulator | SK85_03103 | Q46791 | Negative | 3205524 - 3205967 | 16578.2 |
| hypothetical protein | SK85_03104 | P58664 | Negative | 3206001 - 3206156 | 5602.89 |
| hypothetical protein | SK85_03105 | Q46793 | Negative | 3206378 - 3207085 | 27366.0 |
| type iii secretion apparatus protein orga/mxik | SK85_03106 | Q46795 | Negative | 3207027 - 3207608 | 22677.7 |
| yscj/hrcj family type iii secretion apparatus lipoprotein | SK85_03107 | P41786 | Negative | 3207624 - 3208358 | 27625.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





