Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane transporter yqeg | SK85_03088 | P63342 | Positive | 3195575 - 3196804 | 45101.9 |
| bipartite regulatory protein | SK85_03089 | Q46941 | Positive | 3197264 - 3197896 | 24403.4 |
| hypothetical protein | SK85_03090 | Not Available | Negative | 3197978 - 3198109 | 5236.59 |
| transcriptional regulator | SK85_03091 | Q46942 | Positive | 3198230 - 3199039 | 30839.8 |
| hypothetical protein | SK85_03092 | Q46943 | Positive | 3199032 - 3199514 | 18720.5 |
| hypothetical protein | SK85_03093 | C1P613 | Negative | 3199547 - 3199687 | 5621.02 |
| hypothetical protein | SK85_03094 | P77136 | Negative | 3199663 - 3200088 | 16272.4 |
| hypothetical protein | SK85_03095 | Q46786 | Positive | 3200282 - 3200728 | 16879.5 |
| chaperone | SK85_03096 | Q46787 | Positive | 3200996 - 3201487 | 19094.2 |
| transcriptional regulator | SK85_03097 | Not Available | Positive | 3201822 - 3202826 | 38391.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





