Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prepilin peptidase-dependent protein a | SK85_03068 | P33554 | Negative | 3173435 - 3173905 | 17866.3 |
| thymidylate synthase | SK85_03069 | A7ZQT3 | Negative | 3174089 - 3174883 | 30463.3 |
| prolipoprotein diacylglyceryl transferase | SK85_03070 | A7ZQT4 | Negative | 3174890 - 3175765 | 33109.9 |
| phosphoenolpyruvate-protein phosphotransferase ptsp | SK85_03071 | P37177 | Negative | 3175916 - 3178162 | 83720.7 |
| rna pyrophosphohydrolase | SK85_03072 | A7ZQT6 | Negative | 3178175 - 3178705 | 20796.0 |
| hypothetical protein | SK85_03073 | A0A385XJL2 | Negative | 3179058 - 3179204 | 5231.2 |
| dna mismatch repair protein muth | SK85_03074 | C4ZZY4 | Positive | 3179390 - 3180079 | 25528.9 |
| inner membrane protein | SK85_03075 | P67129 | Positive | 3180148 - 3180861 | 26159.0 |
| lipoprotein | SK85_03076 | P65296 | Positive | 3180999 - 3181217 | 7877.35 |
| protein tas | SK85_03077 | P0A9T4 | Positive | 3181325 - 3182365 | 38501.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





