Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3157335 - 3157411 | Not Available |
| n-acetylmuramoyl-l-alanine amidase amic | SK85_03059 | P63884 | Negative | 3157485 - 3158738 | 45637.1 |
| amino-acid acetyltransferase | SK85_03060 | P0A6C7 | Positive | 3158970 - 3160301 | 49198.1 |
| recbcd enzyme subunit recd | SK85_03061 | P04993 | Negative | 3160363 - 3162189 | 66906.3 |
| recbcd enzyme subunit recb | SK85_03062 | P08394 | Negative | 3162189 - 3165731 | 133956.0 |
| protease 3 | SK85_03063 | P05458 | Negative | 3165724 - 3168612 | 107714.0 |
| recbcd enzyme subunit recc | SK85_03064 | P07648 | Negative | 3168788 - 3172156 | 128855.0 |
| prepilin peptidase-dependent protein c | SK85_03065 | P08372 | Negative | 3172169 - 3172492 | 12004.7 |
| hypothetical protein | SK85_03066 | P08370 | Negative | 3172477 - 3172884 | 14958.1 |
| prepilin peptidase-dependent protein b | SK85_03067 | P08371 | Negative | 3172881 - 3173444 | 20520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





