Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Signal recognition particle protein | SK85_02864 | P0AGD9 | Negative | 2963410 - 2964771 | 49790.5 |
| Inner membrane protein ypjd | SK85_02865 | P64434 | Positive | 2964863 - 2965729 | 32131.5 |
| Hlyc/corc family transporter | SK85_02866 | P37908 | Positive | 2965795 - 2967036 | 46353.9 |
| Heat shock protein | SK85_02867 | B7UH62 | Negative | 2967091 - 2967684 | 21813.1 |
| Dna repair protein recn | SK85_02868 | A7ZQ55 | Positive | 2967807 - 2968685 | 32568.3 |
| Dna repair protein recn | SK85_02869 | P05824 | Positive | 2968771 - 2970432 | 61400.1 |
| Outer membrane protein assembly factor bame | SK85_02870 | P0A938 | Positive | 2970581 - 2970922 | 12302.8 |
| Rnfh family protein | SK85_02871 | P52119 | Negative | 2970984 - 2971274 | 10790.0 |
| Type ii toxin-antitoxin system toxin rata | SK85_02872 | P0AGL5 | Negative | 2971264 - 2971740 | 17727.7 |
| Ssra-binding protein | SK85_02873 | A7ZQ60 | Positive | 2971872 - 2972354 | 18270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





