Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose mutarotase | SK85_03048 | A7ZQP8 | Positive | 3148836 - 3149258 | 15474.0 |
| l-fucose operon activator | SK85_03049 | P0ACK8 | Positive | 3149316 - 3150047 | 27363.7 |
| ribosomal rna large subunit methyltransferase m | SK85_03050 | A7ZQQ1 | Negative | 3150091 - 3151191 | 41907.5 |
| inner membrane protein | SK85_03051 | P0ADR4 | Negative | 3151184 - 3151579 | 14334.0 |
| glycine cleavage system transcriptional activator | SK85_03052 | P0A9F8 | Negative | 3151598 - 3152515 | 34407.4 |
| hypothetical protein | SK85_03053 | P65293 | Negative | 3152866 - 3153093 | 8174.67 |
| cysteine desulfurase csda | SK85_03054 | Q46925 | Positive | 3153285 - 3154490 | 43236.6 |
| sulfur acceptor protein csde | SK85_03055 | P0AGF3 | Positive | 3154490 - 3154933 | 15941.2 |
| trna threonylcarbamoyladenosine dehydratase | SK85_03056 | Q46927 | Negative | 3154984 - 3155790 | 28563.6 |
| membrane-bound lytic murein transglycosylase a | SK85_03057 | P0A936 | Negative | 3156029 - 3157126 | 40412.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





