Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 7-cyano-7-deazaguanine reductase | SK85_03038 | C4ZZU9 | Positive | 3135296 - 3136144 | 32589.3 |
| log family protein ygdh | SK85_03039 | P0ADS0 | Positive | 3136256 - 3137620 | 50975.0 |
| serine transporter | SK85_03040 | P0AAD7 | Positive | 3138177 - 3139466 | 46909.2 |
| l-serine dehydratase 2 | SK85_03041 | P30744 | Positive | 3139524 - 3140891 | 48755.8 |
| flap endonuclease xni | SK85_03042 | A7ZQP2 | Positive | 3140913 - 3141758 | 31456.9 |
| lactaldehyde reductase | SK85_03043 | P0A9S2 | Negative | 3141813 - 3142961 | 40515.7 |
| l-fuculose phosphate aldolase | SK85_03044 | P0AB87 | Negative | 3142989 - 3143636 | 23776.7 |
| l-fucose-proton symporter | SK85_03045 | P11551 | Positive | 3144183 - 3145499 | 47547.6 |
| l-fucose isomerase | SK85_03046 | B7NVV0 | Positive | 3145532 - 3147307 | 64980.3 |
| l-fuculokinase | SK85_03047 | P11553 | Positive | 3147416 - 3148834 | 52261.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





