Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yqce | SK85_03018 | P77031 | Positive | 3110650 - 3111927 | 46833.5 |
| kinase | SK85_03019 | P55138 | Positive | 3111954 - 3113432 | 54179.9 |
| 7-carboxy-7-deazaguanine synthase | SK85_03020 | P64555 | Negative | 3114695 - 3115366 | 25031.0 |
| hypothetical protein | SK85_03021 | C1P612 | Positive | 3115505 - 3115645 | 5383.44 |
| hypothetical protein | SK85_03022 | P55140 | Positive | 3115659 - 3116531 | 32207.3 |
| enolase | SK85_03023 | A7ZQM2 | Negative | 3116591 - 3117889 | 45657.6 |
| ctp synthase | SK85_03024 | A7ZQM3 | Negative | 3117977 - 3119614 | 60377.7 |
| nucleoside triphosphate pyrophosphohydrolase | SK85_03025 | P0AEY4 | Negative | 3119842 - 3120633 | 30414.0 |
| mrna interferase mazf | SK85_03026 | P0AE71 | Negative | 3120704 - 3121039 | 12098.7 |
| antitoxin maze | SK85_03027 | P0AE73 | Negative | 3121039 - 3121287 | 9356.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





