Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein hydrolase activator nlpd | SK85_02978 | P0ADA3 | Negative | 3073293 - 3074432 | 40121.2 |
| protein-l-isoaspartate o-methyltransferase | SK85_02979 | A7ZQI7 | Negative | 3074572 - 3075198 | 23259.2 |
| 5'/3'-nucleotidase sure | SK85_02980 | A7ZQI8 | Negative | 3075192 - 3075953 | 26902.0 |
| trna pseudouridine synthase d | SK85_02981 | A8A3M4 | Negative | 3075934 - 3076983 | 39094.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SK85_02982 | A7ZQJ0 | Negative | 3076980 - 3077459 | 16898.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SK85_02983 | A7ZQJ1 | Negative | 3077459 - 3078169 | 25738.7 |
| cell division protein ftsb | SK85_02984 | A7ZQJ2 | Negative | 3078188 - 3078499 | 11622.7 |
| inner membrane protein ygbe | SK85_02985 | P46141 | Negative | 3078693 - 3079016 | 12018.0 |
| adenylyl-sulfate kinase | SK85_02986 | B1IUS9 | Negative | 3079066 - 3079671 | 22371.7 |
| sulfate adenylyltransferase subunit 1 | SK85_02987 | B1IUS8 | Negative | 3079671 - 3081098 | 52534.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





