Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02968 | Not Available | Negative | 3062561 - 3062695 | 4890.38 |
| dna mismatch repair protein muts | SK85_02969 | C4ZZN7 | Positive | 3062771 - 3065332 | 95280.6 |
| serine/threonine-protein phosphatase 2 | SK85_02970 | P55799 | Positive | 3065438 - 3066094 | 25100.6 |
| transcriptional regulator | SK85_02971 | P52598 | Negative | 3066145 - 3066912 | 27436.3 |
| dehydrogenase, with nad(p)-binding rossmann-fold | SK85_02972 | Q46888 | Positive | 3067108 - 3068016 | 30707.0 |
| hypothetical protein | SK85_02973 | Q46889 | Positive | 3068013 - 3069275 | 44876.6 |
| class ii aldolase | SK85_02974 | Q46890 | Positive | 3069272 - 3069910 | 23223.8 |
| hypothetical protein | SK85_02975 | Q46891 | Positive | 3069915 - 3070691 | 29219.5 |
| inner membrane permease ygbn | SK85_02976 | Q46892 | Positive | 3070780 - 3072144 | 46802.7 |
| rna polymerase sigma factor rpos | SK85_02977 | P13445 | Negative | 3072238 - 3073230 | 37975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





