Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SK85_00293 | P76162 | Positive | 312238 - 313227 | 37179.9 |
| Trna-pro; | Not Available | Not Available | Positive | 312944 - 313020 | Not Available |
| Antitermination protein q | SK85_00294 | Q47274 | Positive | 313245 - 313628 | 14203.3 |
| outer membrane porin protein lc | SK85_00295 | P07238 | Negative | 313818 - 314900 | 39611.6 |
| Putative holin | SK85_00296 | Not Available | Positive | 315474 - 315689 | 7778.49 |
| Lysin | SK85_00297 | P78285 | Positive | 315689 - 316186 | 17936.7 |
| Lysis protein rz | SK85_00298 | P13583 | Positive | 316183 - 316641 | 16833.1 |
| Hypothetical protein | SK85_00299 | Not Available | Positive | 316894 - 317340 | 16752.9 |
| Hypothetical protein | SK85_00300 | Not Available | Positive | 317337 - 317600 | 10077.2 |
| Putative transposase orfa protein of is629 | SK85_00301 | Not Available | Positive | 317812 - 318138 | 12644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





