Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucitol/sorbitol-specific phosphotransferase enzyme iib component | SK85_02938 | P56580 | Positive | 3032070 - 3033029 | 33348.1 |
| glucitol/sorbitol-specific phosphotransferase enzyme iia component | SK85_02939 | P05706 | Positive | 3033040 - 3033411 | 13304.8 |
| sorbitol-6-phosphate 2-dehydrogenase | SK85_02940 | P05707 | Positive | 3033415 - 3034194 | 27859.5 |
| dna-binding transcriptional activator for glucitol operon | SK85_02941 | P15081 | Positive | 3034299 - 3034658 | 12954.0 |
| glucitol operon repressor | SK85_02942 | P15082 | Positive | 3034725 - 3035498 | 28237.8 |
| arabinose 5-phosphate isomerase gutq | SK85_02943 | Q8X4S5 | Positive | 3035491 - 3036456 | 34033.6 |
| anaerobic nitric oxide reductase transcription regulator norr | SK85_02944 | C4ZYV4 | Negative | 3036453 - 3037967 | 55238.7 |
| anaerobic nitric oxide reductase flavorubredoxin | SK85_02945 | P59404 | Positive | 3038154 - 3039593 | 54222.0 |
| nitric oxide reductase flrd-nad(+) reductase | SK85_02946 | A7ZQE0 | Positive | 3039590 - 3040723 | 41355.1 |
| carbamoyltransferase hypf | SK85_02947 | P30131 | Negative | 3040851 - 3043103 | 82070.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





