Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin-like protein nrdh | SK85_02908 | P0AC67 | Positive | 3006299 - 3006544 | 9139.98 |
| protein nrdi | SK85_02909 | P0A774 | Positive | 3006541 - 3006951 | 15341.3 |
| ribonucleoside-diphosphate reductase 2 subunit alpha | SK85_02910 | P39452 | Positive | 3006924 - 3009068 | 80467.5 |
| ribonucleoside-diphosphate reductase 2 subunit beta | SK85_02911 | P37146 | Positive | 3009078 - 3010037 | 36445.1 |
| glycine betaine/l-proline transport atp-binding protein prov | SK85_02912 | P14175 | Positive | 3010391 - 3011593 | 44165.5 |
| glycine betaine/l-proline transport system permease prow | SK85_02913 | P14176 | Positive | 3011586 - 3012650 | 37622.1 |
| glycine betaine-binding periplasmic protein | SK85_02914 | P0AFM3 | Positive | 3012708 - 3013700 | 36024.4 |
| hypothetical protein | SK85_02915 | P76628 | Positive | 3013892 - 3015076 | 41703.9 |
| inner membrane protein ygaz | SK85_02916 | P76630 | Positive | 3015200 - 3015937 | 26109.1 |
| l-valine exporter | SK85_02917 | P43667 | Positive | 3015927 - 3016262 | 12024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





