Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | SK85_02822 | C4ZYI9 | Negative | 2919446 - 2920351 | 33812.1 |
| ribonuclease 3 | SK85_02823 | A7ZQ11 | Negative | 2920348 - 2921028 | 25551.6 |
| signal peptidase i | SK85_02824 | P00803 | Negative | 2921300 - 2922274 | 35962.3 |
| elongation factor 4 | SK85_02825 | A7ZQ13 | Negative | 2922290 - 2924089 | 66574.1 |
| protein rsec | SK85_02826 | P46187 | Negative | 2924287 - 2924766 | 16640.3 |
| sigma-e factor regulatory protein rseb | SK85_02827 | P0AFY0 | Negative | 2924763 - 2925719 | 35751.8 |
| anti-sigma-e factor rsea | SK85_02828 | P0AFX8 | Negative | 2925719 - 2926369 | 24322.8 |
| ecf rna polymerase sigma-e factor | SK85_02829 | P0AGB8 | Negative | 2926402 - 2926977 | 21697.0 |
| l-aspartate oxidase | SK85_02830 | P10902 | Positive | 2927385 - 2929007 | 60340.9 |
| trna1(val) | SK85_02831 | C5W7S9 | Negative | 2928992 - 2929729 | 27271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





