Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase glrk | SK85_02812 | P52101 | Negative | 2906636 - 2908018 | 51438.1 |
| phosphoribosylformylglycinamidine synthase | SK85_02813 | P15254 | Negative | 2908621 - 2912508 | 141411.0 |
| membrane-bound lytic murein transglycosylase f | SK85_02814 | B3Y154 | Positive | 2912766 - 2914322 | 58305.3 |
| trna-specific adenosine deaminase | SK85_02815 | P68398 | Negative | 2914319 - 2914822 | 18718.7 |
| phosphatidylglycerophosphatase c | SK85_02816 | P0AD42 | Negative | 2914880 - 2915515 | 24440.8 |
| transcriptional regulator | SK85_02817 | P37767 | Positive | 2915724 - 2916572 | 30709.3 |
| 4fe-4s cluster-containing protein | SK85_02818 | P52102 | Positive | 2916628 - 2916888 | 9821.82 |
| holo-[acyl-carrier-protein] synthase | SK85_02819 | C4ZYI6 | Negative | 2917583 - 2917963 | 14053.1 |
| pyridoxine 5'-phosphate synthase | SK85_02820 | P0A795 | Negative | 2917963 - 2918694 | 26385.9 |
| dna repair protein reco | SK85_02821 | B7MIQ0 | Negative | 2918706 - 2919434 | 27392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





