Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | SK85_02802 | Not Available | Negative | 2894209 - 2895327 | 40378.0 |
| abc transporter periplasmic-binding protein yphf | SK85_02803 | P77269 | Negative | 2895350 - 2896333 | 35060.2 |
| hypothetical protein | SK85_02804 | P76585 | Negative | 2896430 - 2897899 | 55947.8 |
| hypothetical protein | SK85_02805 | Not Available | Negative | 2897981 - 2899711 | 64876.4 |
| transcriptional regulator | SK85_02806 | P76586 | Positive | 2899829 - 2900653 | 30644.7 |
| serine hydroxymethyltransferase | SK85_02807 | A7ZPZ4 | Negative | 2901219 - 2902472 | 45319.2 |
| flavohemoprotein | SK85_02808 | P24232 | Positive | 2902800 - 2903990 | 43870.1 |
| nitrogen regulatory protein p-ii 1 | SK85_02809 | P0A9Z3 | Negative | 2904035 - 2904373 | 12426.2 |
| transcriptional regulatory protein qsef | SK85_02810 | P0AFU4 | Negative | 2904434 - 2905768 | 49151.3 |
| quorum-sensing regulator protein g | SK85_02811 | P0AD45 | Negative | 2905758 - 2906471 | 27349.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





