Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02762 | P76575 | Negative | 2851398 - 2851613 | 7994.73 |
| gtpase der | SK85_02763 | A7ZPV4 | Negative | 2851683 - 2853155 | 55039.1 |
| outer membrane protein assembly factor bamb | SK85_02764 | Q32D50 | Negative | 2853273 - 2854451 | 41871.6 |
| hypothetical protein | SK85_02765 | P76576 | Negative | 2854462 - 2855082 | 22177.2 |
| histidine-trna ligase | SK85_02766 | A7ZPV7 | Negative | 2855100 - 2856374 | 47032.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SK85_02767 | A7ZPV8 | Negative | 2856485 - 2857603 | 40686.1 |
| cytoskeleton protein rodz | SK85_02768 | Q7ABM8 | Negative | 2857630 - 2858643 | 36174.5 |
| dual-specificity rna methyltransferase rlmn | SK85_02769 | A7ZPW0 | Negative | 2858928 - 2860082 | 43088.0 |
| nucleoside diphosphate kinase | SK85_02770 | A7ZPW1 | Negative | 2860232 - 2860663 | 15464.3 |
| penicillin-binding protein 1c | SK85_02771 | P76577 | Negative | 2860812 - 2863085 | 83532.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





