Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase | SK85_02752 | P0A7B2 | Positive | 2838843 - 2840909 | 80436.1 |
| exopolyphosphatase | SK85_02753 | P0AFL8 | Positive | 2840914 - 2842455 | 58129.4 |
| cyclic di-gmp phosphodiesterase yfgf | SK85_02754 | P77172 | Negative | 2842494 - 2844737 | 85612.8 |
| hypothetical protein | SK85_02755 | Not Available | Negative | 2844919 - 2845071 | 5689.89 |
| hypothetical protein | SK85_02756 | P64546 | Positive | 2845107 - 2845280 | 6856.35 |
| outer membrane lipoprotein | SK85_02757 | P65291 | Positive | 2845594 - 2846109 | 17590.9 |
| hypothetical protein | SK85_02758 | P76573 | Positive | 2846125 - 2846664 | 20231.4 |
| gmp synthase | SK85_02759 | C4ZX82 | Negative | 2846757 - 2848334 | 58682.6 |
| inosine-5'-monophosphate dehydrogenase | SK85_02760 | P0ADG8 | Negative | 2848403 - 2849869 | 52039.7 |
| exodeoxyribonuclease 7 large subunit | SK85_02761 | C4ZX84 | Positive | 2850031 - 2851401 | 51835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





