Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase-4 component c | SK85_02732 | P77858 | Positive | 2818451 - 2819332 | 31927.2 |
| hydrogenase-4 component d | SK85_02733 | P77416 | Positive | 2819349 - 2820788 | 51815.7 |
| hydrogenase-4 component e | SK85_02734 | P0AEW2 | Positive | 2820800 - 2821450 | 23363.0 |
| hydrogenase-4 component f | SK85_02735 | P77437 | Positive | 2821455 - 2823035 | 56770.7 |
| hydrogenase-4 component g | SK85_02736 | P77329 | Positive | 2823025 - 2824692 | 63421.1 |
| hydrogenase 4, fe-s subunit | SK85_02737 | P77423 | Positive | 2824702 - 2825247 | 20160.4 |
| hydrogenase-4 component i | SK85_02738 | P77668 | Positive | 2825244 - 2826002 | 28102.9 |
| processing element hydrogenase 4 | SK85_02739 | P77453 | Positive | 2825995 - 2826408 | 15577.8 |
| dna-binding transcriptional activator, formate sensing | SK85_02740 | P71229 | Positive | 2826438 - 2828450 | 75309.7 |
| formate transporter | SK85_02741 | P77733 | Positive | 2828472 - 2829272 | 28787.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





