Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_01772 | Not Available | Positive | 1806384 - 1806503 | 4431.68 |
| Csp | SK85_01773 | P36995 | Negative | 1807105 - 1807320 | 7717.12 |
| cold shock-like protein cspf | SK85_01774 | P0A977 | Positive | 1807621 - 1807833 | 7563.18 |
| Putative transposase orfa protein of is629 | SK85_01775 | Not Available | Positive | 1808616 - 1808942 | 12644.0 |
| Putative transposase orfb | SK85_01776 | Not Available | Positive | 1808942 - 1809829 | 33679.1 |
| hypothetical protein | SK85_01777 | P55373 | Negative | 1810164 - 1811477 | 50783.7 |
| Hypothetical protein | SK85_01778 | Not Available | Positive | 1811655 - 1811837 | 6768.29 |
| hypothetical protein | SK85_01779 | Not Available | Negative | 1811812 - 1811991 | 7011.01 |
| Methyltransferase | SK85_01780 | Not Available | Negative | 1813144 - 1813500 | 13620.4 |
| Lygf | SK85_01781 | Not Available | Negative | 1813497 - 1813919 | 16256.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





