Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate-protein phosphotransferase | SK85_02672 | P08839 | Positive | 2755394 - 2757121 | 63565.6 |
| glucose-specific phosphotransferase enzyme iia component | SK85_02673 | P69784 | Positive | 2757162 - 2757671 | 18252.1 |
| pyridoxine kinase | SK85_02674 | C4ZVU9 | Negative | 2757714 - 2758565 | 30849.2 |
| hypothetical protein | SK85_02675 | Q47702 | Positive | 2758670 - 2759044 | 13732.8 |
| hypothetical protein | SK85_02676 | P78271 | Positive | 2759077 - 2759811 | 28191.6 |
| cysteine synthase b | SK85_02677 | P16703 | Negative | 2760000 - 2760911 | 32666.2 |
| sulfate/thiosulfate import atp-binding protein cysa | SK85_02678 | P16676 | Negative | 2761045 - 2762142 | 41061.4 |
| sulfate transport system permease cysw | SK85_02679 | P0AEB1 | Negative | 2762132 - 2763007 | 32539.6 |
| sulfate transport system permease cyst | SK85_02680 | P16701 | Negative | 2763007 - 2763840 | 30235.5 |
| thiosulfate-binding protein | SK85_02681 | P16700 | Negative | 2763840 - 2764856 | 37616.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





