Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase ypde | SK85_02642 | P77585 | Negative | 2727476 - 2728513 | 37411.1 |
| aminopeptidase ypdf | SK85_02643 | P76524 | Negative | 2728513 - 2729598 | 39686.4 |
| fructose-like permease iic component | SK85_02644 | Q8FFD5 | Negative | 2729613 - 2730860 | 43981.0 |
| fructose-like phosphotransferase enzyme iib component 1 | SK85_02645 | P69810 | Negative | 2730882 - 2731208 | 11736.0 |
| glucokinase | SK85_02646 | B7UG97 | Negative | 2731427 - 2732392 | 34711.1 |
| ion channel protein | SK85_02647 | P67730 | Positive | 2732596 - 2733852 | 43637.5 |
| hypothetical protein | SK85_02648 | P64543 | Positive | 2733967 - 2734293 | 13263.4 |
| divalent metal cation transporter mnth | SK85_02649 | A7ZPK2 | Negative | 2734434 - 2735672 | 44166.4 |
| nucleoside permease nupc | SK85_02650 | P0AFF3 | Positive | 2736008 - 2737210 | 43478.4 |
| diguanylate cyclase | SK85_02651 | P23842 | Negative | 2737259 - 2739448 | 83559.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





