Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein yfdx | SK85_02632 | P76520 | Negative | 2716733 - 2717368 | 22978.5 |
| lipoprotein | SK85_02633 | O32528 | Positive | 2717664 - 2717939 | 10162.5 |
| inner membrane protein | SK85_02634 | P76521 | Negative | 2718016 - 2718258 | 8874.43 |
| protein ddg | SK85_02635 | P0ACV2 | Positive | 2718611 - 2719531 | 35495.5 |
| glutamate-pyruvate aminotransferase alac | SK85_02636 | P77434 | Negative | 2720023 - 2721261 | 46218.8 |
| sensor histidine kinase ypda | SK85_02637 | P0AA94 | Positive | 2721637 - 2723334 | 62661.3 |
| transcriptional regulatory protein ypdb | SK85_02638 | P0AE40 | Positive | 2723349 - 2724083 | 28722.6 |
| hypothetical protein | SK85_02639 | P77396 | Positive | 2724096 - 2724299 | 7377.03 |
| dna-binding protein | SK85_02640 | Not Available | Positive | 2724318 - 2724953 | 24232.5 |
| multiphosphoryl transfer protein 1 | SK85_02641 | P77439 | Negative | 2724956 - 2727451 | 92087.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





