Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02612 | Not Available | Positive | 2692046 - 2692729 | 23602.2 |
| hypothetical protein | SK85_02613 | Not Available | Positive | 2692805 - 2693260 | 16902.1 |
| hypothetical protein | SK85_02614 | Q8FDS2 | Positive | 2693339 - 2693572 | 8777.4 |
| phage protein | SK85_02615 | P77206 | Positive | 2693672 - 2694490 | 31143.3 |
| phage antirestriction protein | SK85_02616 | P52139 | Positive | 2694545 - 2695030 | 18186.4 |
| phage dna repair protein | SK85_02617 | P76362 | Positive | 2695046 - 2695522 | 17661.4 |
| phage protein | SK85_02618 | P64523 | Positive | 2695591 - 2695812 | 8411.21 |
| sucrose transporter | SK85_02619 | P30000 | Negative | 2696826 - 2698073 | 47019.5 |
| fructokinase | SK85_02620 | P40713 | Negative | 2698145 - 2699059 | 33120.7 |
| sucrose-6-phosphate hydrolase | SK85_02621 | P40714 | Positive | 2699275 - 2700708 | 54477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





