Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SK85_02602 | Not Available | Positive | 2678818 - 2679144 | 12644.0 |
| transposase | SK85_02603 | Not Available | Positive | 2679144 - 2680031 | 33651.1 |
| hypothetical protein | SK85_02604 | Not Available | Positive | 2680484 - 2680690 | 7861.64 |
| hypothetical protein | SK85_02605 | Not Available | Positive | 2680777 - 2681379 | 23653.5 |
| hypothetical protein | SK85_02606 | P52124 | Negative | 2681701 - 2683185 | 55746.4 |
| gtpase | SK85_02607 | P76359 | Positive | 2684414 - 2685286 | 32487.8 |
| antigen 43 | SK85_02608 | P39180 | Positive | 2685657 - 2688779 | 106898.0 |
| inner membrane protein yeer | SK85_02609 | P76361 | Positive | 2688900 - 2690558 | 61714.2 |
| transposase | SK85_02610 | Not Available | Positive | 2690584 - 2690910 | 12644.0 |
| transposase | SK85_02611 | Not Available | Positive | 2690910 - 2691797 | 33679.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





