Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02592 | P0AD34 | Negative | 2667004 - 2667288 | 10318.2 |
| long-chain fatty acid transporter | SK85_02593 | P59741 | Positive | 2667660 - 2669000 | 48580.1 |
| hypothetical protein | SK85_02594 | P76505 | Positive | 2669376 - 2670575 | 45461.8 |
| lipoprotein | SK85_02595 | P76506 | Negative | 2670755 - 2671510 | 28023.2 |
| inner membrane protein yfdc | SK85_02596 | P37327 | Positive | 2671805 - 2672737 | 34484.2 |
| Trna-arg | Not Available | Not Available | Positive | 2672813 - 2672887 | Not Available |
| hypothetical protein | SK85_02598 | Not Available | Positive | 2673180 - 2674253 | 41252.7 |
| hypothetical protein | SK85_02599 | Not Available | Positive | 2674993 - 2676009 | 38958.5 |
| hypothetical protein | SK85_02600 | Not Available | Positive | 2676009 - 2677037 | 40405.1 |
| hypothetical protein | SK85_02601 | Not Available | Negative | 2677867 - 2678457 | 21708.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





