Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02582 | P76498 | Negative | 2655582 - 2656403 | 30262.1 |
| fimbrial adhesin protein | SK85_02583 | P76499 | Negative | 2656405 - 2656944 | 18952.6 |
| fimbrial-like adhesin protein | SK85_02584 | P76500 | Negative | 2656941 - 2657429 | 17889.9 |
| fimbrial-like adhesin protein | SK85_02585 | P76501 | Negative | 2657426 - 2657938 | 17905.5 |
| periplasmic pilin chaperone | SK85_02586 | P77599 | Negative | 2657938 - 2658690 | 27729.6 |
| fimbrial outer membrane usher protein papc | SK85_02587 | P77196 | Negative | 2658710 - 2661355 | 97554.6 |
| fimbrial-like adhesin protein | SK85_02588 | P77288 | Negative | 2661437 - 2662000 | 19822.2 |
| phosphohistidine phosphatase sixa | SK85_02589 | P76502 | Negative | 2662681 - 2663166 | 17208.8 |
| fatty acid oxidation complex subunit alpha | SK85_02590 | B2TWV4 | Negative | 2663369 - 2665513 | 77101.9 |
| 3-ketoacyl-coa thiolase | SK85_02591 | A7ZPF9 | Negative | 2665513 - 2666823 | 46547.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





