Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidophosphoribosyltransferase | SK85_02562 | P0AG16 | Negative | 2635075 - 2636592 | 56491.3 |
| colicin v production protein | SK85_02563 | P08550 | Negative | 2636629 - 2637117 | 17991.0 |
| dedd protein | SK85_02564 | P09549 | Negative | 2637376 - 2638038 | 22939.8 |
| folc protein | SK85_02565 | P08192 | Negative | 2638028 - 2639296 | 45408.2 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | SK85_02566 | A7ZPD1 | Negative | 2639366 - 2640280 | 33323.9 |
| protein deda | SK85_02567 | P0ABP7 | Negative | 2640436 - 2641095 | 24511.7 |
| trna pseudouridine synthase a | SK85_02568 | A8A2I7 | Negative | 2641178 - 2641990 | 30371.2 |
| usg-1 protein | SK85_02569 | P08390 | Negative | 2641990 - 2643003 | 36366.1 |
| erythronate-4-phosphate dehydrogenase | SK85_02570 | B1IXM2 | Negative | 2643069 - 2644205 | 41380.1 |
| flagellar regulator flk | SK85_02571 | P15286 | Positive | 2644304 - 2645299 | 36640.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





