Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide-bond oxidoreductase yfcg | SK85_02552 | P77526 | Positive | 2626972 - 2627619 | 24517.2 |
| d-erythro-7,8-dihydroneopterin triphosphate epimerase | SK85_02553 | P0AC21 | Positive | 2627676 - 2628038 | 14082.8 |
| epimerase yfch | SK85_02554 | P77775 | Positive | 2628059 - 2628955 | 32785.8 |
| transposase | SK85_02555 | P77768 | Negative | 2629003 - 2629893 | 34181.5 |
| histidine transport atp-binding protein hisp | SK85_02556 | P07109 | Negative | 2630090 - 2630863 | 28654.8 |
| histidine transport system permease hism | SK85_02557 | P0AEU5 | Negative | 2630871 - 2631587 | 26871.3 |
| histidine transport system permease hisq | SK85_02558 | P52094 | Negative | 2631584 - 2632270 | 24650.8 |
| histidine-binding periplasmic protein | SK85_02559 | P0AEU2 | Negative | 2632360 - 2633142 | 28484.9 |
| lysine-arginine-ornithine-binding periplasmic protein | SK85_02560 | P09551 | Negative | 2633363 - 2634145 | 27993.1 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase partner protein | SK85_02561 | P0AG04 | Negative | 2634411 - 2634980 | 20696.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





