Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SK85_02542 | P0AFU3 | Negative | 2615871 - 2617703 | 65876.0 |
| sugar phosphatase yfbt | SK85_02543 | P77625 | Negative | 2617790 - 2618440 | 23008.8 |
| hypothetical protein | SK85_02544 | B7MG58 | Negative | 2618451 - 2618945 | 19537.4 |
| inner membrane protein | SK85_02545 | A7ZPA9 | Negative | 2619028 - 2619483 | 17214.1 |
| acetate kinase | SK85_02546 | P0A6A5 | Positive | 2619821 - 2621023 | 43293.0 |
| phosphate acetyltransferase | SK85_02547 | P0A9M8 | Positive | 2621098 - 2623242 | 77134.5 |
| inner membrane protein | SK85_02548 | P39263 | Positive | 2623432 - 2624952 | 54800.0 |
| nudix hydrolase | SK85_02549 | P65558 | Negative | 2624985 - 2625527 | 20376.9 |
| phosphodiesterase yfce | SK85_02550 | P67097 | Negative | 2625585 - 2626136 | 19992.1 |
| glutathione s-transferase yfcf | SK85_02551 | P77544 | Negative | 2626192 - 2626836 | 24327.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





