Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | SK85_01753 | P03734 | Negative | 1792180 - 1792602 | 15638.4 |
| Major tail protein v | SK85_01754 | P03733 | Negative | 1792618 - 1793358 | 25693.9 |
| Tail component | SK85_01755 | P03732 | Negative | 1793366 - 1793761 | 14704.0 |
| Tail component | SK85_01756 | Not Available | Negative | 1793758 - 1794336 | 21590.0 |
| Head-tail joining protein | SK85_01757 | P03714 | Negative | 1794348 - 1794701 | 12793.8 |
| Dna packaging protein | SK85_01758 | P03709 | Negative | 1794713 - 1795108 | 13958.3 |
| Capsid component | SK85_01759 | P03713 | Negative | 1795150 - 1796175 | 38067.2 |
| Head-dna stabilization protein | SK85_01760 | P03712 | Negative | 1796231 - 1796563 | 11622.7 |
| Capsid component | SK85_01761 | P03711 | Negative | 1796573 - 1797904 | 46514.1 |
| Capsid component | SK85_01762 | P03710 | Negative | 1797885 - 1799486 | 59356.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





