Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain BIDMC112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1283364 bp
Thymine Count
1281198 bp
Guanine Count
1324998 bp
Cytosine Count
1318883 bp
Genome Length
5208446 bp
Protein-coding Genes
4697 genes
Non-Coding Genes
378 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease bn | SK85_02522 | B7UFT1 | Positive | 2592393 - 2593310 | 32980.7 |
| protease elad | SK85_02523 | Q47013 | Positive | 2593501 - 2594709 | 45809.3 |
| protein yfbm | SK85_02524 | P76483 | Positive | 2595829 - 2596332 | 19026.8 |
| nadh-quinone oxidoreductase subunit n | SK85_02525 | A7ZP90 | Negative | 2596399 - 2597856 | 52077.3 |
| nadh-quinone oxidoreductase subunit m | SK85_02526 | P0AFE9 | Negative | 2597863 - 2599392 | 56527.9 |
| nadh-quinone oxidoreductase subunit l | SK85_02527 | P33607 | Negative | 2599556 - 2601397 | 66370.0 |
| nadh-quinone oxidoreductase subunit k | SK85_02528 | A8ADW0 | Negative | 2601394 - 2601696 | 10845.8 |
| nadh-quinone oxidoreductase subunit j | SK85_02529 | P0AFE2 | Negative | 2601693 - 2602247 | 19875.9 |
| nadh-quinone oxidoreductase subunit i | SK85_02530 | P0AFD8 | Negative | 2602259 - 2602801 | 20538.9 |
| nadh-quinone oxidoreductase subunit h | SK85_02531 | A7ZP96 | Negative | 2602816 - 2603793 | 36249.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





